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Cluster: HRGMv2_2527_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2527_12 HRGMv2_2527_12_99 113057 114013 + 4.A.1.1.8
TC HRGMv2_2527_12 HRGMv2_2527_12_100 113992 114933 + 4.A.1.1.4
TF HRGMv2_2527_12 HRGMv2_2527_12_101 114994 115803 + HTH_6
NULL(UNKNOWN) HRGMv2_2527_12 HRGMv2_2527_12_102 115790 116287 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2527_12 HRGMv2_2527_12_103 116308 116793 + 4.A.1.1.11
NULL(UNKNOWN) HRGMv2_2527_12 HRGMv2_2527_12_104 116940 117200 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2527_12 HRGMv2_2527_12_105 117239 117895 + Nitroreductase
TC HRGMv2_2527_12 HRGMv2_2527_12_106 118001 119362 + 9.A.40.2.1
STP HRGMv2_2527_12 HRGMv2_2527_12_107 119467 120036 + Pribosyltran
TC HRGMv2_2527_12 HRGMv2_2527_12_108 120085 121389 - 2.A.3.8.12
CAZyme HRGMv2_2527_12 HRGMv2_2527_12_109 121497 122204 + GH25
TC HRGMv2_2527_12 HRGMv2_2527_12_110 122204 123445 + 3.A.18.1.1
TC HRGMv2_2527_12 HRGMv2_2527_12_111 123442 124770 + 4.A.3.2.4
Gene ID: HRGMv2_2527_12_99
Type: TC
Location: 113057 - 114013 (+)
Gene ID: HRGMv2_2527_12_100
Type: TC
Location: 113992 - 114933 (+)
Gene ID: HRGMv2_2527_12_101
Type: TF
Location: 114994 - 115803 (+)
Gene ID: HRGMv2_2527_12_102
Type:
Location: 115790 - 116287 (+)
Gene ID: HRGMv2_2527_12_103
Type: TC
Location: 116308 - 116793 (+)
Gene ID: HRGMv2_2527_12_104
Type:
Location: 116940 - 117200 (+)
Gene ID: HRGMv2_2527_12_105
Type: STP
Location: 117239 - 117895 (+)
Gene ID: HRGMv2_2527_12_106
Type: TC
Location: 118001 - 119362 (+)
Gene ID: HRGMv2_2527_12_107
Type: STP
Location: 119467 - 120036 (+)
Gene ID: HRGMv2_2527_12_108
Type: TC
Location: 120085 - 121389 (-)
Gene ID: HRGMv2_2527_12_109
Type: CAZyme
Location: 121497 - 122204 (+)
Gene ID: HRGMv2_2527_12_110
Type: TC
Location: 122204 - 123445 (+)
Gene ID: HRGMv2_2527_12_111
Type: TC
Location: 123442 - 124770 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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