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Cluster: HRGMv2_2527_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2527_11 HRGMv2_2527_11_24 21109 21984 + 8.A.3.2.4
TC HRGMv2_2527_11 HRGMv2_2527_11_25 22000 22782 + 8.A.3.2.1
pfam HRGMv2_2527_11 HRGMv2_2527_11_26 22785 23555 + CpsB_CapC
TC HRGMv2_2527_11 HRGMv2_2527_11_27 23675 24325 + 9.B.18.1.2
CAZyme HRGMv2_2527_11 HRGMv2_2527_11_28 24330 25412 + GT4
CAZyme HRGMv2_2527_11 HRGMv2_2527_11_29 25415 26464 + GT2
CAZyme HRGMv2_2527_11 HRGMv2_2527_11_30 26473 27597 + GT4
CAZyme HRGMv2_2527_11 HRGMv2_2527_11_31 27599 28609 + GT2
CAZyme HRGMv2_2527_11 HRGMv2_2527_11_32 28627 29637 + GT113
pfam HRGMv2_2527_11 HRGMv2_2527_11_33 29685 30926 + Wzy_C
STP HRGMv2_2527_11 HRGMv2_2527_11_34 30927 32036 + Pyr_redox
TC HRGMv2_2527_11 HRGMv2_2527_11_35 32042 33469 + 2.A.66.2.16
Gene ID: HRGMv2_2527_11_24
Type: TC
Location: 21109 - 21984 (+)
Gene ID: HRGMv2_2527_11_25
Type: TC
Location: 22000 - 22782 (+)
Gene ID: HRGMv2_2527_11_26
Type: pfam
Location: 22785 - 23555 (+)
Gene ID: HRGMv2_2527_11_27
Type: TC
Location: 23675 - 24325 (+)
Gene ID: HRGMv2_2527_11_28
Type: CAZyme
Location: 24330 - 25412 (+)
Gene ID: HRGMv2_2527_11_29
Type: CAZyme
Location: 25415 - 26464 (+)
Gene ID: HRGMv2_2527_11_30
Type: CAZyme
Location: 26473 - 27597 (+)
Gene ID: HRGMv2_2527_11_31
Type: CAZyme
Location: 27599 - 28609 (+)
Gene ID: HRGMv2_2527_11_32
Type: CAZyme
Location: 28627 - 29637 (+)
Gene ID: HRGMv2_2527_11_33
Type: pfam
Location: 29685 - 30926 (+)
Gene ID: HRGMv2_2527_11_34
Type: STP
Location: 30927 - 32036 (+)
Gene ID: HRGMv2_2527_11_35
Type: TC
Location: 32042 - 33469 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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