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Cluster: HRGMv2_2527_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2527_35 HRGMv2_2527_35_20 22243 23496 + 3.A.1.1.28
TC HRGMv2_2527_35 HRGMv2_2527_35_21 23509 24384 + 3.A.1.1.28
TC HRGMv2_2527_35 HRGMv2_2527_35_22 24399 25232 + 3.A.1.1.28
TC HRGMv2_2527_35 HRGMv2_2527_35_23 25259 26371 + 3.A.1.1.20
CAZyme HRGMv2_2527_35 HRGMv2_2527_35_24 26384 28585 + GH36
CAZyme HRGMv2_2527_35 HRGMv2_2527_35_25 28596 30038 + GH13_18
Gene ID: HRGMv2_2527_35_20
Type: TC
Location: 22243 - 23496 (+)
Gene ID: HRGMv2_2527_35_21
Type: TC
Location: 23509 - 24384 (+)
Gene ID: HRGMv2_2527_35_22
Type: TC
Location: 24399 - 25232 (+)
Gene ID: HRGMv2_2527_35_23
Type: TC
Location: 25259 - 26371 (+)
Gene ID: HRGMv2_2527_35_24
Type: CAZyme
Location: 26384 - 28585 (+)
Gene ID: HRGMv2_2527_35_25
Type: CAZyme
Location: 28596 - 30038 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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