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Cluster: HRGMv2_2527_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2527_33 HRGMv2_2527_33_1 3 815 - 3.A.1.1.27
TC HRGMv2_2527_33 HRGMv2_2527_33_2 818 1849 - 3.A.1.1.27
NULL(UNKNOWN) HRGMv2_2527_33 HRGMv2_2527_33_3 2042 2167 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2527_33 HRGMv2_2527_33_4 2247 3473 - 3.A.1.1.27
TC HRGMv2_2527_33 HRGMv2_2527_33_5 3565 4671 - 3.A.1.1.20
pfam HRGMv2_2527_33 HRGMv2_2527_33_6 4694 5359 - Hydrolase | HAD_2
CAZyme HRGMv2_2527_33 HRGMv2_2527_33_7 5352 7616 - GH65
CAZyme HRGMv2_2527_33 HRGMv2_2527_33_8 7793 9514 - CBM34 | GH13_20
CAZyme HRGMv2_2527_33 HRGMv2_2527_33_9 9518 11176 - GH13_31
Gene ID: HRGMv2_2527_33_1
Type: TC
Location: 3 - 815 (-)
Gene ID: HRGMv2_2527_33_2
Type: TC
Location: 818 - 1849 (-)
Gene ID: HRGMv2_2527_33_3
Type:
Location: 2042 - 2167 (-)
Gene ID: HRGMv2_2527_33_4
Type: TC
Location: 2247 - 3473 (-)
Gene ID: HRGMv2_2527_33_5
Type: TC
Location: 3565 - 4671 (-)
Gene ID: HRGMv2_2527_33_6
Type: pfam
Location: 4694 - 5359 (-)
Gene ID: HRGMv2_2527_33_7
Type: CAZyme
Location: 5352 - 7616 (-)
Gene ID: HRGMv2_2527_33_8
Type: CAZyme
Location: 7793 - 9514 (-)
Gene ID: HRGMv2_2527_33_9
Type: CAZyme
Location: 9518 - 11176 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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