Cluster: HRGMv2_2521_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2521
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2521_3 | HRGMv2_2521_3_26 | 31963 | 32943 | - | GT2 |
| sulfatase | HRGMv2_2521_3 | HRGMv2_2521_3_27 | 32961 | 34538 | - | S1_97 |
| pfam | HRGMv2_2521_3 | HRGMv2_2521_3_28 | 34725 | 36200 | + | LytR_cpsA_psr |
| TC | HRGMv2_2521_3 | HRGMv2_2521_3_29 | 36243 | 37358 | - | 2.A.86.1.8 |
Gene ID: HRGMv2_2521_3_26
Type: CAZyme
Location: 31963 - 32943 (-)
Type: CAZyme
Location: 31963 - 32943 (-)
Gene ID: HRGMv2_2521_3_27
Type: sulfatase
Location: 32961 - 34538 (-)
Type: sulfatase
Location: 32961 - 34538 (-)
Gene ID: HRGMv2_2521_3_28
Type: pfam
Location: 34725 - 36200 (+)
Type: pfam
Location: 34725 - 36200 (+)
Gene ID: HRGMv2_2521_3_29
Type: TC
Location: 36243 - 37358 (-)
Type: TC
Location: 36243 - 37358 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus caviae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.