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Cluster: HRGMv2_2521_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2521_7 HRGMv2_2521_7_72 80092 81477 + 2.A.3.8.6
STP HRGMv2_2521_7 HRGMv2_2521_7_73 81933 82574 + TetR_N
NULL(UNKNOWN) HRGMv2_2521_7 HRGMv2_2521_7_74 82679 83086 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2521_7 HRGMv2_2521_7_75 83223 84764 + GT4
CAZyme HRGMv2_2521_7 HRGMv2_2521_7_76 84766 86268 + GT4
pfam HRGMv2_2521_7 HRGMv2_2521_7_77 86385 88424 + SdrG_C_C | Big_8
CAZyme HRGMv2_2521_7 HRGMv2_2521_7_78 88610 90292 + GH13_31
TC HRGMv2_2521_7 HRGMv2_2521_7_79 90310 91695 + 2.A.2.6.3
TC HRGMv2_2521_7 HRGMv2_2521_7_80 91776 93212 - 2.A.3.1.2
Gene ID: HRGMv2_2521_7_72
Type: TC
Location: 80092 - 81477 (+)
Gene ID: HRGMv2_2521_7_73
Type: STP
Location: 81933 - 82574 (+)
Gene ID: HRGMv2_2521_7_74
Type:
Location: 82679 - 83086 (-)
Gene ID: HRGMv2_2521_7_75
Type: CAZyme
Location: 83223 - 84764 (+)
Gene ID: HRGMv2_2521_7_76
Type: CAZyme
Location: 84766 - 86268 (+)
Gene ID: HRGMv2_2521_7_77
Type: pfam
Location: 86385 - 88424 (+)
Gene ID: HRGMv2_2521_7_78
Type: CAZyme
Location: 88610 - 90292 (+)
Gene ID: HRGMv2_2521_7_79
Type: TC
Location: 90310 - 91695 (+)
Gene ID: HRGMv2_2521_7_80
Type: TC
Location: 91776 - 93212 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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