dbCAN Logo

Cluster: HRGMv2_2520_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2520_2 HRGMv2_2520_2_23 26617 27558 + 2.A.115.1.1
CAZyme HRGMv2_2520_2 HRGMv2_2520_2_24 27592 29643 - GH13_14
TF HRGMv2_2520_2 HRGMv2_2520_2_25 29652 30635 - LacI
NULL(UNKNOWN) HRGMv2_2520_2 HRGMv2_2520_2_26 30647 31459 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2520_2 HRGMv2_2520_2_27 31688 32530 - 3.A.1.1.26
TC HRGMv2_2520_2 HRGMv2_2520_2_28 32532 33827 - 3.A.1.1.26
TC HRGMv2_2520_2 HRGMv2_2520_2_29 33909 35165 - 3.A.1.1.26
CAZyme HRGMv2_2520_2 HRGMv2_2520_2_30 35644 37176 + GH77
CAZyme HRGMv2_2520_2 HRGMv2_2520_2_31 37219 39477 + GT35
Gene ID: HRGMv2_2520_2_23
Type: TC
Location: 26617 - 27558 (+)
Gene ID: HRGMv2_2520_2_24
Type: CAZyme
Location: 27592 - 29643 (-)
Gene ID: HRGMv2_2520_2_25
Type: TF
Location: 29652 - 30635 (-)
Gene ID: HRGMv2_2520_2_26
Type:
Location: 30647 - 31459 (-)
Gene ID: HRGMv2_2520_2_27
Type: TC
Location: 31688 - 32530 (-)
Gene ID: HRGMv2_2520_2_28
Type: TC
Location: 32532 - 33827 (-)
Gene ID: HRGMv2_2520_2_29
Type: TC
Location: 33909 - 35165 (-)
Gene ID: HRGMv2_2520_2_30
Type: CAZyme
Location: 35644 - 37176 (+)
Gene ID: HRGMv2_2520_2_31
Type: CAZyme
Location: 37219 - 39477 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List