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Cluster: HRGMv2_2520_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2520_9 HRGMv2_2520_9_30 29063 33952 + GH95
TC HRGMv2_2520_9 HRGMv2_2520_9_31 34007 34810 - 3.A.1.34.1
TC HRGMv2_2520_9 HRGMv2_2520_9_32 34824 35717 - 3.A.1.34.1
TC HRGMv2_2520_9 HRGMv2_2520_9_33 35728 36702 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_2520_9 HRGMv2_2520_9_34 37131 38105 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2520_9 HRGMv2_2520_9_35 38377 39564 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2520_9 HRGMv2_2520_9_36 39678 41027 - 9.A.40.2.1
TF HRGMv2_2520_9 HRGMv2_2520_9_37 41132 42613 - HTH_Mga | Mga | PRD_Mga
TC HRGMv2_2520_9 HRGMv2_2520_9_38 42769 43896 - 2.A.86.1.8
TC HRGMv2_2520_9 HRGMv2_2520_9_39 43953 44756 + 3.A.1.15.8
TC HRGMv2_2520_9 HRGMv2_2520_9_40 44839 46893 - 2.A.36.3.2
Gene ID: HRGMv2_2520_9_30
Type: CAZyme
Location: 29063 - 33952 (+)
Gene ID: HRGMv2_2520_9_31
Type: TC
Location: 34007 - 34810 (-)
Gene ID: HRGMv2_2520_9_32
Type: TC
Location: 34824 - 35717 (-)
Gene ID: HRGMv2_2520_9_33
Type: TC
Location: 35728 - 36702 (-)
Gene ID: HRGMv2_2520_9_34
Type:
Location: 37131 - 38105 (-)
Gene ID: HRGMv2_2520_9_35
Type:
Location: 38377 - 39564 (-)
Gene ID: HRGMv2_2520_9_36
Type: TC
Location: 39678 - 41027 (-)
Gene ID: HRGMv2_2520_9_37
Type: TF
Location: 41132 - 42613 (-)
Gene ID: HRGMv2_2520_9_38
Type: TC
Location: 42769 - 43896 (-)
Gene ID: HRGMv2_2520_9_39
Type: TC
Location: 43953 - 44756 (+)
Gene ID: HRGMv2_2520_9_40
Type: TC
Location: 44839 - 46893 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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