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Cluster: HRGMv2_2516_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2516_3 HRGMv2_2516_3_142 143136 143891 + 3.A.1.106.12
pfam HRGMv2_2516_3 HRGMv2_2516_3_143 144075 144938 - SAM_HAT_N | SAM_HAT_C
TC HRGMv2_2516_3 HRGMv2_2516_3_144 145453 146322 - 8.A.5.1.6
CAZyme HRGMv2_2516_3 HRGMv2_2516_3_145 146473 147936 + GH1
TC HRGMv2_2516_3 HRGMv2_2516_3_146 148078 149331 + 2.A.23.4.1
TC HRGMv2_2516_3 HRGMv2_2516_3_147 149425 150819 + 9.A.40.2.1
pfam HRGMv2_2516_3 HRGMv2_2516_3_148 150853 151443 - YhhN
CAZyme HRGMv2_2516_3 HRGMv2_2516_3_149 151578 154238 + GH65
Gene ID: HRGMv2_2516_3_142
Type: TC
Location: 143136 - 143891 (+)
Gene ID: HRGMv2_2516_3_143
Type: pfam
Location: 144075 - 144938 (-)
Gene ID: HRGMv2_2516_3_144
Type: TC
Location: 145453 - 146322 (-)
Gene ID: HRGMv2_2516_3_145
Type: CAZyme
Location: 146473 - 147936 (+)
Gene ID: HRGMv2_2516_3_146
Type: TC
Location: 148078 - 149331 (+)
Gene ID: HRGMv2_2516_3_147
Type: TC
Location: 149425 - 150819 (+)
Gene ID: HRGMv2_2516_3_148
Type: pfam
Location: 150853 - 151443 (-)
Gene ID: HRGMv2_2516_3_149
Type: CAZyme
Location: 151578 - 154238 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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