Cluster: HRGMv2_2516_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2516
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2516_14 | HRGMv2_2516_14_2 | 403 | 1542 | - | GH88 |
| NULL(UNKNOWN) | HRGMv2_2516_14 | HRGMv2_2516_14_3 | 1553 | 2215 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2516_14 | HRGMv2_2516_14_4 | 2225 | 3112 | - | 3.A.1.1.36 |
| TC | HRGMv2_2516_14 | HRGMv2_2516_14_5 | 3129 | 4031 | - | 3.A.1.1.4 |
| TC | HRGMv2_2516_14 | HRGMv2_2516_14_6 | 4124 | 5419 | - | 3.A.1.1.34 |
| CAZyme | HRGMv2_2516_14 | HRGMv2_2516_14_7 | 5449 | 7140 | - | PL33_2 |
Gene ID: HRGMv2_2516_14_2
Type: CAZyme
Location: 403 - 1542 (-)
Type: CAZyme
Location: 403 - 1542 (-)
Gene ID: HRGMv2_2516_14_3
Type:
Location: 1553 - 2215 (-)
Type:
Location: 1553 - 2215 (-)
Gene ID: HRGMv2_2516_14_4
Type: TC
Location: 2225 - 3112 (-)
Type: TC
Location: 2225 - 3112 (-)
Gene ID: HRGMv2_2516_14_5
Type: TC
Location: 3129 - 4031 (-)
Type: TC
Location: 3129 - 4031 (-)
Gene ID: HRGMv2_2516_14_6
Type: TC
Location: 4124 - 5419 (-)
Type: TC
Location: 4124 - 5419 (-)
Gene ID: HRGMv2_2516_14_7
Type: CAZyme
Location: 5449 - 7140 (-)
Type: CAZyme
Location: 5449 - 7140 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Schleiferilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.