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Cluster: HRGMv2_2516_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2516_11 HRGMv2_2516_11_42 46914 47615 - 3.A.1.125.2
STP HRGMv2_2516_11 HRGMv2_2516_11_43 47760 48311 + TetR_N
CAZyme HRGMv2_2516_11 HRGMv2_2516_11_44 48292 49230 - GH43_22
CAZyme HRGMv2_2516_11 HRGMv2_2516_11_45 49231 51225 - GH42
CAZyme HRGMv2_2516_11 HRGMv2_2516_11_46 51238 52731 - GH51_1
TF HRGMv2_2516_11 HRGMv2_2516_11_47 52879 53793 + HTH_5
TC HRGMv2_2516_11 HRGMv2_2516_11_48 53887 54696 + 3.A.1.15.2
TC HRGMv2_2516_11 HRGMv2_2516_11_49 54693 55550 + 3.A.1.15.2
TC HRGMv2_2516_11 HRGMv2_2516_11_50 55525 56487 + 3.A.1.15.6
TC HRGMv2_2516_11 HRGMv2_2516_11_51 56612 58249 + 3.A.1.112.8
CAZyme HRGMv2_2516_11 HRGMv2_2516_11_52 58246 59106 - GH28
NULL(UNKNOWN) HRGMv2_2516_11 HRGMv2_2516_11_53 59057 59545 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2516_11 HRGMv2_2516_11_54 59547 60221 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2516_11 HRGMv2_2516_11_55 60260 61129 - 3.A.1.1.34
TC HRGMv2_2516_11 HRGMv2_2516_11_56 61132 62064 - 3.A.1.1.11
TC HRGMv2_2516_11 HRGMv2_2516_11_57 62152 63435 - 3.A.1.1.44
Gene ID: HRGMv2_2516_11_42
Type: TC
Location: 46914 - 47615 (-)
Gene ID: HRGMv2_2516_11_43
Type: STP
Location: 47760 - 48311 (+)
Gene ID: HRGMv2_2516_11_44
Type: CAZyme
Location: 48292 - 49230 (-)
Gene ID: HRGMv2_2516_11_45
Type: CAZyme
Location: 49231 - 51225 (-)
Gene ID: HRGMv2_2516_11_46
Type: CAZyme
Location: 51238 - 52731 (-)
Gene ID: HRGMv2_2516_11_47
Type: TF
Location: 52879 - 53793 (+)
Gene ID: HRGMv2_2516_11_48
Type: TC
Location: 53887 - 54696 (+)
Gene ID: HRGMv2_2516_11_49
Type: TC
Location: 54693 - 55550 (+)
Gene ID: HRGMv2_2516_11_50
Type: TC
Location: 55525 - 56487 (+)
Gene ID: HRGMv2_2516_11_51
Type: TC
Location: 56612 - 58249 (+)
Gene ID: HRGMv2_2516_11_52
Type: CAZyme
Location: 58246 - 59106 (-)
Gene ID: HRGMv2_2516_11_53
Type:
Location: 59057 - 59545 (-)
Gene ID: HRGMv2_2516_11_54
Type:
Location: 59547 - 60221 (-)
Gene ID: HRGMv2_2516_11_55
Type: TC
Location: 60260 - 61129 (-)
Gene ID: HRGMv2_2516_11_56
Type: TC
Location: 61132 - 62064 (-)
Gene ID: HRGMv2_2516_11_57
Type: TC
Location: 62152 - 63435 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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