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Cluster: HRGMv2_2516_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2516_5 HRGMv2_2516_5_105 101315 102574 + 3.A.1.1.36
TC HRGMv2_2516_5 HRGMv2_2516_5_106 102588 103499 + 3.A.1.1.20
TC HRGMv2_2516_5 HRGMv2_2516_5_107 103515 104360 + 3.A.1.1.36
NULL(UNKNOWN) HRGMv2_2516_5 HRGMv2_2516_5_108 104370 104753 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2516_5 HRGMv2_2516_5_109 104770 106599 + GH2
pfam HRGMv2_2516_5 HRGMv2_2516_5_110 106761 107567 + Mn_catalase
peptidase HRGMv2_2516_5 HRGMv2_2516_5_111 108074 109984 - M13.UPW
TC HRGMv2_2516_5 HRGMv2_2516_5_112 110106 111521 + 2.A.1.3.50
Gene ID: HRGMv2_2516_5_105
Type: TC
Location: 101315 - 102574 (+)
Gene ID: HRGMv2_2516_5_106
Type: TC
Location: 102588 - 103499 (+)
Gene ID: HRGMv2_2516_5_107
Type: TC
Location: 103515 - 104360 (+)
Gene ID: HRGMv2_2516_5_108
Type:
Location: 104370 - 104753 (+)
Gene ID: HRGMv2_2516_5_109
Type: CAZyme
Location: 104770 - 106599 (+)
Gene ID: HRGMv2_2516_5_110
Type: pfam
Location: 106761 - 107567 (+)
Gene ID: HRGMv2_2516_5_111
Type: peptidase
Location: 108074 - 109984 (-)
Gene ID: HRGMv2_2516_5_112
Type: TC
Location: 110106 - 111521 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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