Cluster: HRGMv2_2504_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2504_3 | HRGMv2_2504_3_87 | 92635 | 93069 | + | 4.A.6.1.14 |
| CAZyme | HRGMv2_2504_3 | HRGMv2_2504_3_88 | 93081 | 94271 | + | GH88 |
| TC | HRGMv2_2504_3 | HRGMv2_2504_3_89 | 94282 | 94773 | + | 4.A.6.1.14 |
| TC | HRGMv2_2504_3 | HRGMv2_2504_3_90 | 94788 | 95567 | + | 4.A.6.1.14 |
| TC | HRGMv2_2504_3 | HRGMv2_2504_3_91 | 95554 | 96372 | + | 4.A.6.1.14 |
| pfam | HRGMv2_2504_3 | HRGMv2_2504_3_92 | 96372 | 96665 | + | YajC |
| CAZyme | HRGMv2_2504_3 | HRGMv2_2504_3_93 | 96687 | 98588 | + | PL12_1 |
Gene ID: HRGMv2_2504_3_87
Type: TC
Location: 92635 - 93069 (+)
Type: TC
Location: 92635 - 93069 (+)
Gene ID: HRGMv2_2504_3_88
Type: CAZyme
Location: 93081 - 94271 (+)
Type: CAZyme
Location: 93081 - 94271 (+)
Gene ID: HRGMv2_2504_3_89
Type: TC
Location: 94282 - 94773 (+)
Type: TC
Location: 94282 - 94773 (+)
Gene ID: HRGMv2_2504_3_90
Type: TC
Location: 94788 - 95567 (+)
Type: TC
Location: 94788 - 95567 (+)
Gene ID: HRGMv2_2504_3_91
Type: TC
Location: 95554 - 96372 (+)
Type: TC
Location: 95554 - 96372 (+)
Gene ID: HRGMv2_2504_3_92
Type: pfam
Location: 96372 - 96665 (+)
Type: pfam
Location: 96372 - 96665 (+)
Gene ID: HRGMv2_2504_3_93
Type: CAZyme
Location: 96687 - 98588 (+)
Type: CAZyme
Location: 96687 - 98588 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.