Cluster: HRGMv2_2504_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2504_3 | HRGMv2_2504_3_79 | 82126 | 83457 | - | 2.A.66.1.37 |
| STP | HRGMv2_2504_3 | HRGMv2_2504_3_80 | 83462 | 84055 | - | TetR_N |
| pfam | HRGMv2_2504_3 | HRGMv2_2504_3_81 | 85026 | 85538 | + | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 |
| CAZyme | HRGMv2_2504_3 | HRGMv2_2504_3_82 | 85888 | 89091 | + | CBM70 | PL8_1 |
Gene ID: HRGMv2_2504_3_79
Type: TC
Location: 82126 - 83457 (-)
Type: TC
Location: 82126 - 83457 (-)
Gene ID: HRGMv2_2504_3_80
Type: STP
Location: 83462 - 84055 (-)
Type: STP
Location: 83462 - 84055 (-)
Gene ID: HRGMv2_2504_3_81
Type: pfam
Location: 85026 - 85538 (+)
Type: pfam
Location: 85026 - 85538 (+)
Gene ID: HRGMv2_2504_3_82
Type: CAZyme
Location: 85888 - 89091 (+)
Type: CAZyme
Location: 85888 - 89091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.