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Cluster: HRGMv2_2504_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2504_2 HRGMv2_2504_2_92 90953 91876 - 3.A.1.1.29
TC HRGMv2_2504_2 HRGMv2_2504_2_93 91890 92819 - 3.A.1.1.10
CAZyme HRGMv2_2504_2 HRGMv2_2504_2_94 93177 95057 - GH20
pfam HRGMv2_2504_2 HRGMv2_2504_2_95 95051 95932 - ROK
CAZyme HRGMv2_2504_2 HRGMv2_2504_2_96 96004 98649 - GH38
CAZyme HRGMv2_2504_2 HRGMv2_2504_2_97 98891 100171 - GH125
CAZyme HRGMv2_2504_2 HRGMv2_2504_2_98 100342 102429 + GH92
CAZyme HRGMv2_2504_2 HRGMv2_2504_2_99 102466 104145 - GH29
TC HRGMv2_2504_2 HRGMv2_2504_2_100 104670 106175 - 3.A.1.15.3
TC HRGMv2_2504_2 HRGMv2_2504_2_101 106185 106991 - 3.A.1.15.3
TC HRGMv2_2504_2 HRGMv2_2504_2_102 106984 107688 - 3.A.1.15.3
Gene ID: HRGMv2_2504_2_92
Type: TC
Location: 90953 - 91876 (-)
Gene ID: HRGMv2_2504_2_93
Type: TC
Location: 91890 - 92819 (-)
Gene ID: HRGMv2_2504_2_94
Type: CAZyme
Location: 93177 - 95057 (-)
Gene ID: HRGMv2_2504_2_95
Type: pfam
Location: 95051 - 95932 (-)
Gene ID: HRGMv2_2504_2_96
Type: CAZyme
Location: 96004 - 98649 (-)
Gene ID: HRGMv2_2504_2_97
Type: CAZyme
Location: 98891 - 100171 (-)
Gene ID: HRGMv2_2504_2_98
Type: CAZyme
Location: 100342 - 102429 (+)
Gene ID: HRGMv2_2504_2_99
Type: CAZyme
Location: 102466 - 104145 (-)
Gene ID: HRGMv2_2504_2_100
Type: TC
Location: 104670 - 106175 (-)
Gene ID: HRGMv2_2504_2_101
Type: TC
Location: 106185 - 106991 (-)
Gene ID: HRGMv2_2504_2_102
Type: TC
Location: 106984 - 107688 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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