Cluster: HRGMv2_2504_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2504_13 | HRGMv2_2504_13_24 | 20298 | 21449 | + | CE9 |
| pfam | HRGMv2_2504_13 | HRGMv2_2504_13_25 | 21603 | 21968 | + | DUF1033 |
| TC | HRGMv2_2504_13 | HRGMv2_2504_13_26 | 22030 | 22971 | + | 3.A.14.1.2 |
| TC | HRGMv2_2504_13 | HRGMv2_2504_13_27 | 22919 | 23935 | + | 3.A.14.1.1 |
| TC | HRGMv2_2504_13 | HRGMv2_2504_13_28 | 23937 | 24260 | + | 3.A.14.1.2 |
Gene ID: HRGMv2_2504_13_24
Type: CAZyme
Location: 20298 - 21449 (+)
Type: CAZyme
Location: 20298 - 21449 (+)
Gene ID: HRGMv2_2504_13_25
Type: pfam
Location: 21603 - 21968 (+)
Type: pfam
Location: 21603 - 21968 (+)
Gene ID: HRGMv2_2504_13_26
Type: TC
Location: 22030 - 22971 (+)
Type: TC
Location: 22030 - 22971 (+)
Gene ID: HRGMv2_2504_13_27
Type: TC
Location: 22919 - 23935 (+)
Type: TC
Location: 22919 - 23935 (+)
Gene ID: HRGMv2_2504_13_28
Type: TC
Location: 23937 - 24260 (+)
Type: TC
Location: 23937 - 24260 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.