Cluster: HRGMv2_2504_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2504_6 | HRGMv2_2504_6_98 | 105775 | 106878 | + | GT4 |
| CAZyme | HRGMv2_2504_6 | HRGMv2_2504_6_99 | 106880 | 107866 | + | GT2 |
| pfam | HRGMv2_2504_6 | HRGMv2_2504_6_100 | 107882 | 109339 | + | O-ag_pol_Wzy |
| NULL(UNKNOWN) | HRGMv2_2504_6 | HRGMv2_2504_6_101 | 109343 | 110380 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2504_6 | HRGMv2_2504_6_102 | 110607 | 112091 | + | 2.A.66.2.22 |
Gene ID: HRGMv2_2504_6_98
Type: CAZyme
Location: 105775 - 106878 (+)
Type: CAZyme
Location: 105775 - 106878 (+)
Gene ID: HRGMv2_2504_6_99
Type: CAZyme
Location: 106880 - 107866 (+)
Type: CAZyme
Location: 106880 - 107866 (+)
Gene ID: HRGMv2_2504_6_100
Type: pfam
Location: 107882 - 109339 (+)
Type: pfam
Location: 107882 - 109339 (+)
Gene ID: HRGMv2_2504_6_101
Type:
Location: 109343 - 110380 (+)
Type:
Location: 109343 - 110380 (+)
Gene ID: HRGMv2_2504_6_102
Type: TC
Location: 110607 - 112091 (+)
Type: TC
Location: 110607 - 112091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.