Cluster: HRGMv2_2504_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2504_6 | HRGMv2_2504_6_79 | 85445 | 86602 | + | 3.A.1.11.7 |
| TC | HRGMv2_2504_6 | HRGMv2_2504_6_80 | 86583 | 87389 | + | 3.A.1.11.7 |
| TC | HRGMv2_2504_6 | HRGMv2_2504_6_81 | 87386 | 88159 | + | 3.A.1.11.7 |
| TC | HRGMv2_2504_6 | HRGMv2_2504_6_82 | 88156 | 89226 | + | 3.A.1.11.7 |
| pfam | HRGMv2_2504_6 | HRGMv2_2504_6_83 | 89484 | 89969 | + | LOR |
| pfam | HRGMv2_2504_6 | HRGMv2_2504_6_84 | 89991 | 92609 | + | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| CAZyme | HRGMv2_2504_6 | HRGMv2_2504_6_85 | 92697 | 94145 | - | GH13_5 |
Gene ID: HRGMv2_2504_6_79
Type: TC
Location: 85445 - 86602 (+)
Type: TC
Location: 85445 - 86602 (+)
Gene ID: HRGMv2_2504_6_80
Type: TC
Location: 86583 - 87389 (+)
Type: TC
Location: 86583 - 87389 (+)
Gene ID: HRGMv2_2504_6_81
Type: TC
Location: 87386 - 88159 (+)
Type: TC
Location: 87386 - 88159 (+)
Gene ID: HRGMv2_2504_6_82
Type: TC
Location: 88156 - 89226 (+)
Type: TC
Location: 88156 - 89226 (+)
Gene ID: HRGMv2_2504_6_83
Type: pfam
Location: 89484 - 89969 (+)
Type: pfam
Location: 89484 - 89969 (+)
Gene ID: HRGMv2_2504_6_84
Type: pfam
Location: 89991 - 92609 (+)
Type: pfam
Location: 89991 - 92609 (+)
Gene ID: HRGMv2_2504_6_85
Type: CAZyme
Location: 92697 - 94145 (-)
Type: CAZyme
Location: 92697 - 94145 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.