Cluster: HRGMv2_2504_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2504_5 | HRGMv2_2504_5_33 | 27603 | 29042 | + | GH1 |
| pfam | HRGMv2_2504_5 | HRGMv2_2504_5_34 | 29162 | 30106 | + | PMI_typeI_cat | MPI_cupin_dom |
| TC | HRGMv2_2504_5 | HRGMv2_2504_5_35 | 30146 | 31486 | - | 2.A.22.5.3 |
Gene ID: HRGMv2_2504_5_33
Type: CAZyme
Location: 27603 - 29042 (+)
Type: CAZyme
Location: 27603 - 29042 (+)
Gene ID: HRGMv2_2504_5_34
Type: pfam
Location: 29162 - 30106 (+)
Type: pfam
Location: 29162 - 30106 (+)
Gene ID: HRGMv2_2504_5_35
Type: TC
Location: 30146 - 31486 (-)
Type: TC
Location: 30146 - 31486 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.