Cluster: HRGMv2_2500_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2500
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2500_3 | HRGMv2_2500_3_123 | 126681 | 126998 | + | 4.A.3.1.1 |
| TC | HRGMv2_2500_3 | HRGMv2_2500_3_124 | 126998 | 128692 | + | 4.A.3.1.1 |
| CAZyme | HRGMv2_2500_3 | HRGMv2_2500_3_125 | 128777 | 130183 | + | GH1 |
Gene ID: HRGMv2_2500_3_123
Type: TC
Location: 126681 - 126998 (+)
Type: TC
Location: 126681 - 126998 (+)
Gene ID: HRGMv2_2500_3_124
Type: TC
Location: 126998 - 128692 (+)
Type: TC
Location: 126998 - 128692 (+)
Gene ID: HRGMv2_2500_3_125
Type: CAZyme
Location: 128777 - 130183 (+)
Type: CAZyme
Location: 128777 - 130183 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.