Cluster: HRGMv2_2500_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2500
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2500_2 | HRGMv2_2500_2_174 | 175476 | 175874 | - | 9.B.124.1.4 |
| TC | HRGMv2_2500_2 | HRGMv2_2500_2_175 | 176200 | 178050 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_2500_2 | HRGMv2_2500_2_176 | 178126 | 178956 | - | GT2 |
| TC | HRGMv2_2500_2 | HRGMv2_2500_2_177 | 179178 | 180344 | + | 2.A.1.17.3 |
Gene ID: HRGMv2_2500_2_174
Type: TC
Location: 175476 - 175874 (-)
Type: TC
Location: 175476 - 175874 (-)
Gene ID: HRGMv2_2500_2_175
Type: TC
Location: 176200 - 178050 (-)
Type: TC
Location: 176200 - 178050 (-)
Gene ID: HRGMv2_2500_2_176
Type: CAZyme
Location: 178126 - 178956 (-)
Type: CAZyme
Location: 178126 - 178956 (-)
Gene ID: HRGMv2_2500_2_177
Type: TC
Location: 179178 - 180344 (+)
Type: TC
Location: 179178 - 180344 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.