Cluster: HRGMv2_2500_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2500
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2500_12 | HRGMv2_2500_12_21 | 19741 | 20892 | + | CE9 |
| pfam | HRGMv2_2500_12 | HRGMv2_2500_12_22 | 21045 | 21410 | + | DUF1033 |
| TC | HRGMv2_2500_12 | HRGMv2_2500_12_23 | 21475 | 22416 | + | 3.A.14.1.2 |
| TC | HRGMv2_2500_12 | HRGMv2_2500_12_24 | 22436 | 23380 | + | 3.A.14.1.1 |
| TC | HRGMv2_2500_12 | HRGMv2_2500_12_25 | 23382 | 23705 | + | 3.A.14.1.2 |
Gene ID: HRGMv2_2500_12_21
Type: CAZyme
Location: 19741 - 20892 (+)
Type: CAZyme
Location: 19741 - 20892 (+)
Gene ID: HRGMv2_2500_12_22
Type: pfam
Location: 21045 - 21410 (+)
Type: pfam
Location: 21045 - 21410 (+)
Gene ID: HRGMv2_2500_12_23
Type: TC
Location: 21475 - 22416 (+)
Type: TC
Location: 21475 - 22416 (+)
Gene ID: HRGMv2_2500_12_24
Type: TC
Location: 22436 - 23380 (+)
Type: TC
Location: 22436 - 23380 (+)
Gene ID: HRGMv2_2500_12_25
Type: TC
Location: 23382 - 23705 (+)
Type: TC
Location: 23382 - 23705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.