Cluster: HRGMv2_2500_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2500
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2500_12 | HRGMv2_2500_12_15 | 12068 | 13348 | + | 2.A.66.1.34 |
| pfam | HRGMv2_2500_12 | HRGMv2_2500_12_16 | 13352 | 14008 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| CAZyme | HRGMv2_2500_12 | HRGMv2_2500_12_17 | 14138 | 15352 | + | CBM50 |
Gene ID: HRGMv2_2500_12_15
Type: TC
Location: 12068 - 13348 (+)
Type: TC
Location: 12068 - 13348 (+)
Gene ID: HRGMv2_2500_12_16
Type: pfam
Location: 13352 - 14008 (+)
Type: pfam
Location: 13352 - 14008 (+)
Gene ID: HRGMv2_2500_12_17
Type: CAZyme
Location: 14138 - 15352 (+)
Type: CAZyme
Location: 14138 - 15352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.