Cluster: HRGMv2_2500_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2500
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2500_7 | HRGMv2_2500_7_86 | 94371 | 95711 | + | 2.A.22.5.3 |
| pfam | HRGMv2_2500_7 | HRGMv2_2500_7_87 | 95753 | 96697 | - | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | HRGMv2_2500_7 | HRGMv2_2500_7_88 | 96817 | 98256 | - | GH1 |
Gene ID: HRGMv2_2500_7_86
Type: TC
Location: 94371 - 95711 (+)
Type: TC
Location: 94371 - 95711 (+)
Gene ID: HRGMv2_2500_7_87
Type: pfam
Location: 95753 - 96697 (-)
Type: pfam
Location: 95753 - 96697 (-)
Gene ID: HRGMv2_2500_7_88
Type: CAZyme
Location: 96817 - 98256 (-)
Type: CAZyme
Location: 96817 - 98256 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.