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Cluster: HRGMv2_2499_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2499_1 HRGMv2_2499_1_522 533268 534551 + 2.A.40.1.4
TC HRGMv2_2499_1 HRGMv2_2499_1_523 534596 535501 - 2.A.7.3.31
peptidase HRGMv2_2499_1 HRGMv2_2499_1_524 535510 536445 - S12.UPW
pfam HRGMv2_2499_1 HRGMv2_2499_1_525 536442 537167 - CppA_N | CppA_C
TC HRGMv2_2499_1 HRGMv2_2499_1_526 537278 538147 - 1.A.8.2.2
pfam HRGMv2_2499_1 HRGMv2_2499_1_527 538305 539471 - CPSase_L_D2 | ATP-grasp_4
peptidase HRGMv2_2499_1 HRGMv2_2499_1_528 539484 540224 - S09.UPW
CAZyme HRGMv2_2499_1 HRGMv2_2499_1_529 540245 541069 - CE1
Gene ID: HRGMv2_2499_1_522
Type: TC
Location: 533268 - 534551 (+)
Gene ID: HRGMv2_2499_1_523
Type: TC
Location: 534596 - 535501 (-)
Gene ID: HRGMv2_2499_1_524
Type: peptidase
Location: 535510 - 536445 (-)
Gene ID: HRGMv2_2499_1_525
Type: pfam
Location: 536442 - 537167 (-)
Gene ID: HRGMv2_2499_1_526
Type: TC
Location: 537278 - 538147 (-)
Gene ID: HRGMv2_2499_1_527
Type: pfam
Location: 538305 - 539471 (-)
Gene ID: HRGMv2_2499_1_528
Type: peptidase
Location: 539484 - 540224 (-)
Gene ID: HRGMv2_2499_1_529
Type: CAZyme
Location: 540245 - 541069 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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