Cluster: HRGMv2_2499_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2499
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2499_5 | HRGMv2_2499_5_81 | 76742 | 77146 | - | 4.A.6.1.18 |
| TC | HRGMv2_2499_5 | HRGMv2_2499_5_82 | 77150 | 77971 | - | 4.A.6.1.18 |
| TC | HRGMv2_2499_5 | HRGMv2_2499_5_83 | 77958 | 78863 | - | 4.A.6.1.18 |
| TC | HRGMv2_2499_5 | HRGMv2_2499_5_84 | 78890 | 79366 | - | 4.A.6.1.18 |
| CAZyme | HRGMv2_2499_5 | HRGMv2_2499_5_85 | 79363 | 81150 | - | GH35 |
| TF | HRGMv2_2499_5 | HRGMv2_2499_5_86 | 81472 | 82188 | + | GntR |
| CAZyme | HRGMv2_2499_5 | HRGMv2_2499_5_87 | 82491 | 86246 | + | GH20 | GH20 |
Gene ID: HRGMv2_2499_5_81
Type: TC
Location: 76742 - 77146 (-)
Type: TC
Location: 76742 - 77146 (-)
Gene ID: HRGMv2_2499_5_82
Type: TC
Location: 77150 - 77971 (-)
Type: TC
Location: 77150 - 77971 (-)
Gene ID: HRGMv2_2499_5_83
Type: TC
Location: 77958 - 78863 (-)
Type: TC
Location: 77958 - 78863 (-)
Gene ID: HRGMv2_2499_5_84
Type: TC
Location: 78890 - 79366 (-)
Type: TC
Location: 78890 - 79366 (-)
Gene ID: HRGMv2_2499_5_85
Type: CAZyme
Location: 79363 - 81150 (-)
Type: CAZyme
Location: 79363 - 81150 (-)
Gene ID: HRGMv2_2499_5_86
Type: TF
Location: 81472 - 82188 (+)
Type: TF
Location: 81472 - 82188 (+)
Gene ID: HRGMv2_2499_5_87
Type: CAZyme
Location: 82491 - 86246 (+)
Type: CAZyme
Location: 82491 - 86246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.