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Cluster: HRGMv2_2499_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2499_3 HRGMv2_2499_3_153 179477 180121 - 9.B.28.1.4
pfam HRGMv2_2499_3 HRGMv2_2499_3_154 180142 180594 - DUF386
TC HRGMv2_2499_3 HRGMv2_2499_3_155 180984 181823 - 3.A.1.1.34
TC HRGMv2_2499_3 HRGMv2_2499_3_156 181839 182726 - 3.A.1.1.20
STP HRGMv2_2499_3 HRGMv2_2499_3_157 182924 184252 - SBP_bac_1
pfam HRGMv2_2499_3 HRGMv2_2499_3_158 184366 185064 - NanE
CAZyme HRGMv2_2499_3 HRGMv2_2499_3_159 185297 188638 - CBM40 | GH33
CAZyme HRGMv2_2499_3 HRGMv2_2499_3_160 188974 189954 - CE7
Gene ID: HRGMv2_2499_3_153
Type: TC
Location: 179477 - 180121 (-)
Gene ID: HRGMv2_2499_3_154
Type: pfam
Location: 180142 - 180594 (-)
Gene ID: HRGMv2_2499_3_155
Type: TC
Location: 180984 - 181823 (-)
Gene ID: HRGMv2_2499_3_156
Type: TC
Location: 181839 - 182726 (-)
Gene ID: HRGMv2_2499_3_157
Type: STP
Location: 182924 - 184252 (-)
Gene ID: HRGMv2_2499_3_158
Type: pfam
Location: 184366 - 185064 (-)
Gene ID: HRGMv2_2499_3_159
Type: CAZyme
Location: 185297 - 188638 (-)
Gene ID: HRGMv2_2499_3_160
Type: CAZyme
Location: 188974 - 189954 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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