Cluster: HRGMv2_2499_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2499
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2499_2 | HRGMv2_2499_2_79 | 109978 | 113694 | + | CBM41 | CBM41 | GH13_12 |
| TC | HRGMv2_2499_2 | HRGMv2_2499_2_80 | 113896 | 114660 | - | 3.A.1.3.14 |
| TC | HRGMv2_2499_2 | HRGMv2_2499_2_81 | 114670 | 115392 | - | 3.A.1.3.13 |
| TC | HRGMv2_2499_2 | HRGMv2_2499_2_82 | 115396 | 116088 | - | 3.A.1.3.13 |
| TC | HRGMv2_2499_2 | HRGMv2_2499_2_83 | 116121 | 116999 | - | 3.A.1.3.28 |
Gene ID: HRGMv2_2499_2_79
Type: CAZyme
Location: 109978 - 113694 (+)
Type: CAZyme
Location: 109978 - 113694 (+)
Gene ID: HRGMv2_2499_2_80
Type: TC
Location: 113896 - 114660 (-)
Type: TC
Location: 113896 - 114660 (-)
Gene ID: HRGMv2_2499_2_81
Type: TC
Location: 114670 - 115392 (-)
Type: TC
Location: 114670 - 115392 (-)
Gene ID: HRGMv2_2499_2_82
Type: TC
Location: 115396 - 116088 (-)
Type: TC
Location: 115396 - 116088 (-)
Gene ID: HRGMv2_2499_2_83
Type: TC
Location: 116121 - 116999 (-)
Type: TC
Location: 116121 - 116999 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BY
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.