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Cluster: HRGMv2_2498_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2498_58 HRGMv2_2498_58_5 5702 6526 + CE1
peptidase HRGMv2_2498_58 HRGMv2_2498_58_6 6547 7287 + S09.UPW
pfam HRGMv2_2498_58 HRGMv2_2498_58_7 7300 8478 + CPSase_L_D2 | ATP-grasp_4
TC HRGMv2_2498_58 HRGMv2_2498_58_8 8640 9509 + 1.A.8.2.2
pfam HRGMv2_2498_58 HRGMv2_2498_58_9 9621 10346 + CppA_N | CppA_C
peptidase HRGMv2_2498_58 HRGMv2_2498_58_10 10343 11278 + S12.950
TC HRGMv2_2498_58 HRGMv2_2498_58_11 11287 12192 + 2.A.7.3.31
TC HRGMv2_2498_58 HRGMv2_2498_58_12 12235 13518 - 2.A.40.1.4
Gene ID: HRGMv2_2498_58_5
Type: CAZyme
Location: 5702 - 6526 (+)
Gene ID: HRGMv2_2498_58_6
Type: peptidase
Location: 6547 - 7287 (+)
Gene ID: HRGMv2_2498_58_7
Type: pfam
Location: 7300 - 8478 (+)
Gene ID: HRGMv2_2498_58_8
Type: TC
Location: 8640 - 9509 (+)
Gene ID: HRGMv2_2498_58_9
Type: pfam
Location: 9621 - 10346 (+)
Gene ID: HRGMv2_2498_58_10
Type: peptidase
Location: 10343 - 11278 (+)
Gene ID: HRGMv2_2498_58_11
Type: TC
Location: 11287 - 12192 (+)
Gene ID: HRGMv2_2498_58_12
Type: TC
Location: 12235 - 13518 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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