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Cluster: HRGMv2_2496_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2496_3 HRGMv2_2496_3_40 34544 36088 + 2.A.1.3.61
pfam HRGMv2_2496_3 HRGMv2_2496_3_41 36088 36807 + DUF4811
pfam HRGMv2_2496_3 HRGMv2_2496_3_42 37133 38041 + NAGPA
CAZyme HRGMv2_2496_3 HRGMv2_2496_3_43 38104 39534 + CBM50
TC HRGMv2_2496_3 HRGMv2_2496_3_44 39545 39826 + 3.A.1.104.1
NULL(UNKNOWN) HRGMv2_2496_3 HRGMv2_2496_3_45 39887 40351 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2496_3 HRGMv2_2496_3_46 40368 41846 + GT2
CAZyme HRGMv2_2496_3 HRGMv2_2496_3_47 41843 43405 + GT2
Gene ID: HRGMv2_2496_3_40
Type: TC
Location: 34544 - 36088 (+)
Gene ID: HRGMv2_2496_3_41
Type: pfam
Location: 36088 - 36807 (+)
Gene ID: HRGMv2_2496_3_42
Type: pfam
Location: 37133 - 38041 (+)
Gene ID: HRGMv2_2496_3_43
Type: CAZyme
Location: 38104 - 39534 (+)
Gene ID: HRGMv2_2496_3_44
Type: TC
Location: 39545 - 39826 (+)
Gene ID: HRGMv2_2496_3_45
Type:
Location: 39887 - 40351 (+)
Gene ID: HRGMv2_2496_3_46
Type: CAZyme
Location: 40368 - 41846 (+)
Gene ID: HRGMv2_2496_3_47
Type: CAZyme
Location: 41843 - 43405 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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