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Cluster: HRGMv2_2496_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2496_2 HRGMv2_2496_2_67 65336 66772 - GH1
TC HRGMv2_2496_2 HRGMv2_2496_2_68 66862 68199 - 4.A.3.2.2
TF HRGMv2_2496_2 HRGMv2_2496_2_69 68492 69220 - HTH_6
TC HRGMv2_2496_2 HRGMv2_2496_2_70 69314 69664 - 4.A.3.2.4
TC HRGMv2_2496_2 HRGMv2_2496_2_71 69747 70073 - 4.A.3.2.4
TF HRGMv2_2496_2 HRGMv2_2496_2_72 70315 71061 - HTH_6
pfam HRGMv2_2496_2 HRGMv2_2496_2_73 71177 71713 - DUF218
TC HRGMv2_2496_2 HRGMv2_2496_2_74 71765 73105 - 3.A.18.1.1
Gene ID: HRGMv2_2496_2_67
Type: CAZyme
Location: 65336 - 66772 (-)
Gene ID: HRGMv2_2496_2_68
Type: TC
Location: 66862 - 68199 (-)
Gene ID: HRGMv2_2496_2_69
Type: TF
Location: 68492 - 69220 (-)
Gene ID: HRGMv2_2496_2_70
Type: TC
Location: 69314 - 69664 (-)
Gene ID: HRGMv2_2496_2_71
Type: TC
Location: 69747 - 70073 (-)
Gene ID: HRGMv2_2496_2_72
Type: TF
Location: 70315 - 71061 (-)
Gene ID: HRGMv2_2496_2_73
Type: pfam
Location: 71177 - 71713 (-)
Gene ID: HRGMv2_2496_2_74
Type: TC
Location: 71765 - 73105 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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