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Cluster: HRGMv2_2496_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2496_2 HRGMv2_2496_2_14 8961 10181 - GH3
pfam HRGMv2_2496_2 HRGMv2_2496_2_15 10178 11017 - Lipase_GDSL | Lipase_GDSL_2
pfam HRGMv2_2496_2 HRGMv2_2496_2_16 11072 11908 - DegV
TC HRGMv2_2496_2 HRGMv2_2496_2_17 12110 12763 + 1.C.113.1.1
TC HRGMv2_2496_2 HRGMv2_2496_2_18 12793 13638 - 3.A.1.1.39
TC HRGMv2_2496_2 HRGMv2_2496_2_19 13625 14539 - 3.A.1.1.4
TC HRGMv2_2496_2 HRGMv2_2496_2_20 14676 15941 - 3.A.1.1.20
CAZyme HRGMv2_2496_2 HRGMv2_2496_2_21 15995 17833 - GH65
Gene ID: HRGMv2_2496_2_14
Type: CAZyme
Location: 8961 - 10181 (-)
Gene ID: HRGMv2_2496_2_15
Type: pfam
Location: 10178 - 11017 (-)
Gene ID: HRGMv2_2496_2_16
Type: pfam
Location: 11072 - 11908 (-)
Gene ID: HRGMv2_2496_2_17
Type: TC
Location: 12110 - 12763 (+)
Gene ID: HRGMv2_2496_2_18
Type: TC
Location: 12793 - 13638 (-)
Gene ID: HRGMv2_2496_2_19
Type: TC
Location: 13625 - 14539 (-)
Gene ID: HRGMv2_2496_2_20
Type: TC
Location: 14676 - 15941 (-)
Gene ID: HRGMv2_2496_2_21
Type: CAZyme
Location: 15995 - 17833 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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