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Cluster: HRGMv2_2496_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2496_16 HRGMv2_2496_16_1 423 2084 - CBM91 | GH43_11
CAZyme HRGMv2_2496_16 HRGMv2_2496_16_2 2117 3298 - GH5_44
TC HRGMv2_2496_16 HRGMv2_2496_16_3 3595 4791 + 2.A.1.68.1
NULL(UNKNOWN) HRGMv2_2496_16 HRGMv2_2496_16_4 4791 4895 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2496_16 HRGMv2_2496_16_5 4932 5690 + HTH_AraC | HTH_AraC
TC HRGMv2_2496_16 HRGMv2_2496_16_6 6000 7067 - 3.A.1.11.7
TC HRGMv2_2496_16 HRGMv2_2496_16_7 7115 7915 - 3.A.1.11.7
TC HRGMv2_2496_16 HRGMv2_2496_16_8 7917 8705 - 3.A.1.11.7
TC HRGMv2_2496_16 HRGMv2_2496_16_9 8702 9982 - 3.A.1.11.7
pfam HRGMv2_2496_16 HRGMv2_2496_16_10 10443 11342 - FAD_binding_4 | MurB_C
TC HRGMv2_2496_16 HRGMv2_2496_16_11 11385 11984 - 2.A.88.5.2
Gene ID: HRGMv2_2496_16_1
Type: CAZyme
Location: 423 - 2084 (-)
Gene ID: HRGMv2_2496_16_2
Type: CAZyme
Location: 2117 - 3298 (-)
Gene ID: HRGMv2_2496_16_3
Type: TC
Location: 3595 - 4791 (+)
Gene ID: HRGMv2_2496_16_4
Type:
Location: 4791 - 4895 (+)
Gene ID: HRGMv2_2496_16_5
Type: TF
Location: 4932 - 5690 (+)
Gene ID: HRGMv2_2496_16_6
Type: TC
Location: 6000 - 7067 (-)
Gene ID: HRGMv2_2496_16_7
Type: TC
Location: 7115 - 7915 (-)
Gene ID: HRGMv2_2496_16_8
Type: TC
Location: 7917 - 8705 (-)
Gene ID: HRGMv2_2496_16_9
Type: TC
Location: 8702 - 9982 (-)
Gene ID: HRGMv2_2496_16_10
Type: pfam
Location: 10443 - 11342 (-)
Gene ID: HRGMv2_2496_16_11
Type: TC
Location: 11385 - 11984 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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