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Cluster: HRGMv2_2496_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2496_12 HRGMv2_2496_12_47 50880 53135 - GH65
CAZyme HRGMv2_2496_12 HRGMv2_2496_12_48 53158 54783 - GH13_31
CAZyme HRGMv2_2496_12 HRGMv2_2496_12_49 54826 56400 - GH13_36
pfam HRGMv2_2496_12 HRGMv2_2496_12_50 56390 56995 - Hexapep | Mac | Hexapep_2
CAZyme HRGMv2_2496_12 HRGMv2_2496_12_51 57022 58617 - GH13_31
CAZyme HRGMv2_2496_12 HRGMv2_2496_12_52 58932 60686 - CBM34 | GH13_20
TC HRGMv2_2496_12 HRGMv2_2496_12_53 61059 62288 + 3.A.1.1.27
TC HRGMv2_2496_12 HRGMv2_2496_12_54 62367 63749 + 3.A.1.1.27
TC HRGMv2_2496_12 HRGMv2_2496_12_55 63755 64621 + 3.A.1.1.27
Gene ID: HRGMv2_2496_12_47
Type: CAZyme
Location: 50880 - 53135 (-)
Gene ID: HRGMv2_2496_12_48
Type: CAZyme
Location: 53158 - 54783 (-)
Gene ID: HRGMv2_2496_12_49
Type: CAZyme
Location: 54826 - 56400 (-)
Gene ID: HRGMv2_2496_12_50
Type: pfam
Location: 56390 - 56995 (-)
Gene ID: HRGMv2_2496_12_51
Type: CAZyme
Location: 57022 - 58617 (-)
Gene ID: HRGMv2_2496_12_52
Type: CAZyme
Location: 58932 - 60686 (-)
Gene ID: HRGMv2_2496_12_53
Type: TC
Location: 61059 - 62288 (+)
Gene ID: HRGMv2_2496_12_54
Type: TC
Location: 62367 - 63749 (+)
Gene ID: HRGMv2_2496_12_55
Type: TC
Location: 63755 - 64621 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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