Cluster: HRGMv2_2496_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2496
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2496_7 | HRGMv2_2496_7_41 | 42046 | 43605 | + | 2.A.1.3.61 |
| pfam | HRGMv2_2496_7 | HRGMv2_2496_7_42 | 43602 | 44438 | + | DUF4811 |
| pfam | HRGMv2_2496_7 | HRGMv2_2496_7_43 | 44947 | 46035 | + | Epimerase_2 |
| CAZyme | HRGMv2_2496_7 | HRGMv2_2496_7_44 | 46317 | 48479 | + | GT2 |
Gene ID: HRGMv2_2496_7_41
Type: TC
Location: 42046 - 43605 (+)
Type: TC
Location: 42046 - 43605 (+)
Gene ID: HRGMv2_2496_7_42
Type: pfam
Location: 43602 - 44438 (+)
Type: pfam
Location: 43602 - 44438 (+)
Gene ID: HRGMv2_2496_7_43
Type: pfam
Location: 44947 - 46035 (+)
Type: pfam
Location: 44947 - 46035 (+)
Gene ID: HRGMv2_2496_7_44
Type: CAZyme
Location: 46317 - 48479 (+)
Type: CAZyme
Location: 46317 - 48479 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus cremoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.