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Cluster: HRGMv2_2496_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2496_5 HRGMv2_2496_5_75 74205 75578 + 2.A.1.1.41
pfam HRGMv2_2496_5 HRGMv2_2496_5_76 75663 78131 + XFP | XFP_C | XFP_N
CAZyme HRGMv2_2496_5 HRGMv2_2496_5_77 78220 80373 - GH92
TF HRGMv2_2496_5 HRGMv2_2496_5_78 80370 81407 - GntR
CAZyme HRGMv2_2496_5 HRGMv2_2496_5_79 81611 82939 + GH125
CAZyme HRGMv2_2496_5 HRGMv2_2496_5_80 82974 85652 + GH38
TC HRGMv2_2496_5 HRGMv2_2496_5_81 85649 86581 + 3.A.1.1.10
TC HRGMv2_2496_5 HRGMv2_2496_5_82 86636 87556 + 3.A.1.1.29
pfam HRGMv2_2496_5 HRGMv2_2496_5_83 87660 89111 + SBP_bac_1 | DUF3502 | SBP_bac_8
CAZyme HRGMv2_2496_5 HRGMv2_2496_5_84 89190 90161 + GH20
CAZyme HRGMv2_2496_5 HRGMv2_2496_5_85 90161 91750 + GH13_31
CAZyme HRGMv2_2496_5 HRGMv2_2496_5_86 91772 94543 + CBM32 | GH85
TC HRGMv2_2496_5 HRGMv2_2496_5_87 94646 95254 + 9.B.28.1.11
CAZyme HRGMv2_2496_5 HRGMv2_2496_5_88 95288 96727 + GH1
Gene ID: HRGMv2_2496_5_75
Type: TC
Location: 74205 - 75578 (+)
Gene ID: HRGMv2_2496_5_76
Type: pfam
Location: 75663 - 78131 (+)
Gene ID: HRGMv2_2496_5_77
Type: CAZyme
Location: 78220 - 80373 (-)
Gene ID: HRGMv2_2496_5_78
Type: TF
Location: 80370 - 81407 (-)
Gene ID: HRGMv2_2496_5_79
Type: CAZyme
Location: 81611 - 82939 (+)
Gene ID: HRGMv2_2496_5_80
Type: CAZyme
Location: 82974 - 85652 (+)
Gene ID: HRGMv2_2496_5_81
Type: TC
Location: 85649 - 86581 (+)
Gene ID: HRGMv2_2496_5_82
Type: TC
Location: 86636 - 87556 (+)
Gene ID: HRGMv2_2496_5_83
Type: pfam
Location: 87660 - 89111 (+)
Gene ID: HRGMv2_2496_5_84
Type: CAZyme
Location: 89190 - 90161 (+)
Gene ID: HRGMv2_2496_5_85
Type: CAZyme
Location: 90161 - 91750 (+)
Gene ID: HRGMv2_2496_5_86
Type: CAZyme
Location: 91772 - 94543 (+)
Gene ID: HRGMv2_2496_5_87
Type: TC
Location: 94646 - 95254 (+)
Gene ID: HRGMv2_2496_5_88
Type: CAZyme
Location: 95288 - 96727 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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