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Cluster: HRGMv2_2496_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2496_3 HRGMv2_2496_3_199 198893 200554 + 3.A.1.5.14
TC HRGMv2_2496_3 HRGMv2_2496_3_200 200627 201727 + 3.A.1.5.37
TC HRGMv2_2496_3 HRGMv2_2496_3_201 201727 202707 + 3.A.1.5.6
TC HRGMv2_2496_3 HRGMv2_2496_3_202 202709 203728 + 3.A.1.5.14
TC HRGMv2_2496_3 HRGMv2_2496_3_203 203728 204792 + 3.A.1.5.37
CAZyme HRGMv2_2496_3 HRGMv2_2496_3_204 204869 206554 + GH3
pfam HRGMv2_2496_3 HRGMv2_2496_3_205 206681 207013 + Fn3-like
CAZyme HRGMv2_2496_3 HRGMv2_2496_3_206 207010 208452 + GH1
pfam HRGMv2_2496_3 HRGMv2_2496_3_207 208455 209402 + ROK
pfam HRGMv2_2496_3 HRGMv2_2496_3_208 209504 210139 + Epimerase | NmrA | NAD_binding_10
TC HRGMv2_2496_3 HRGMv2_2496_3_209 210312 211781 + 2.A.3.7.6
Gene ID: HRGMv2_2496_3_199
Type: TC
Location: 198893 - 200554 (+)
Gene ID: HRGMv2_2496_3_200
Type: TC
Location: 200627 - 201727 (+)
Gene ID: HRGMv2_2496_3_201
Type: TC
Location: 201727 - 202707 (+)
Gene ID: HRGMv2_2496_3_202
Type: TC
Location: 202709 - 203728 (+)
Gene ID: HRGMv2_2496_3_203
Type: TC
Location: 203728 - 204792 (+)
Gene ID: HRGMv2_2496_3_204
Type: CAZyme
Location: 204869 - 206554 (+)
Gene ID: HRGMv2_2496_3_205
Type: pfam
Location: 206681 - 207013 (+)
Gene ID: HRGMv2_2496_3_206
Type: CAZyme
Location: 207010 - 208452 (+)
Gene ID: HRGMv2_2496_3_207
Type: pfam
Location: 208455 - 209402 (+)
Gene ID: HRGMv2_2496_3_208
Type: pfam
Location: 209504 - 210139 (+)
Gene ID: HRGMv2_2496_3_209
Type: TC
Location: 210312 - 211781 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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