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Cluster: HRGMv2_2495_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2495_1 HRGMv2_2495_1_252 271886 274141 - GH65
CAZyme HRGMv2_2495_1 HRGMv2_2495_1_253 274164 275768 - GH13_31
CAZyme HRGMv2_2495_1 HRGMv2_2495_1_254 275844 277418 - GH13_36
pfam HRGMv2_2495_1 HRGMv2_2495_1_255 277408 278013 - Hexapep | Mac | Hexapep_2
CAZyme HRGMv2_2495_1 HRGMv2_2495_1_256 278040 279665 - GH13_31
CAZyme HRGMv2_2495_1 HRGMv2_2495_1_257 279872 281626 - CBM34 | GH13_20
STP HRGMv2_2495_1 HRGMv2_2495_1_258 281994 283226 + SBP_bac_1
TC HRGMv2_2495_1 HRGMv2_2495_1_259 283298 284656 + 3.A.1.1.27
TC HRGMv2_2495_1 HRGMv2_2495_1_260 284660 285517 + 3.A.1.1.27
Gene ID: HRGMv2_2495_1_252
Type: CAZyme
Location: 271886 - 274141 (-)
Gene ID: HRGMv2_2495_1_253
Type: CAZyme
Location: 274164 - 275768 (-)
Gene ID: HRGMv2_2495_1_254
Type: CAZyme
Location: 275844 - 277418 (-)
Gene ID: HRGMv2_2495_1_255
Type: pfam
Location: 277408 - 278013 (-)
Gene ID: HRGMv2_2495_1_256
Type: CAZyme
Location: 278040 - 279665 (-)
Gene ID: HRGMv2_2495_1_257
Type: CAZyme
Location: 279872 - 281626 (-)
Gene ID: HRGMv2_2495_1_258
Type: STP
Location: 281994 - 283226 (+)
Gene ID: HRGMv2_2495_1_259
Type: TC
Location: 283298 - 284656 (+)
Gene ID: HRGMv2_2495_1_260
Type: TC
Location: 284660 - 285517 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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