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Cluster: HRGMv2_2495_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_31 26455 27663 + GT4
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_32 27653 28591 + GT2
pfam HRGMv2_2495_12 HRGMv2_2495_12_33 28592 29401 + ABC2_membrane
TC HRGMv2_2495_12 HRGMv2_2495_12_34 29404 30594 + 3.A.1.103.5
pfam HRGMv2_2495_12 HRGMv2_2495_12_35 30587 31948 + DUF2142
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_36 31956 34976 + GT2
pfam HRGMv2_2495_12 HRGMv2_2495_12_37 34973 36358 + DUF2142
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_38 36379 37626 + GT4
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_39 37630 38466 + GT2
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_40 38463 39248 + GT2
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_41 39250 39984 + GT2
pfam HRGMv2_2495_12 HRGMv2_2495_12_42 39988 40341 + DUF2304
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_43 40331 41308 + GT2
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_44 41308 42270 + GT2
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_45 42279 43241 + GT2
pfam HRGMv2_2495_12 HRGMv2_2495_12_46 43238 44056 + LicD
TC HRGMv2_2495_12 HRGMv2_2495_12_47 44074 45510 + 2.A.66.2.23
pfam HRGMv2_2495_12 HRGMv2_2495_12_48 45689 47800 + GDPD | ChW | ChW | ChW | ChW | ChW | ChW
pfam HRGMv2_2495_12 HRGMv2_2495_12_49 47806 48228 + CTP_transf_like
CAZyme HRGMv2_2495_12 HRGMv2_2495_12_50 48254 50326 - GH25
Gene ID: HRGMv2_2495_12_31
Type: CAZyme
Location: 26455 - 27663 (+)
Gene ID: HRGMv2_2495_12_32
Type: CAZyme
Location: 27653 - 28591 (+)
Gene ID: HRGMv2_2495_12_33
Type: pfam
Location: 28592 - 29401 (+)
Gene ID: HRGMv2_2495_12_34
Type: TC
Location: 29404 - 30594 (+)
Gene ID: HRGMv2_2495_12_35
Type: pfam
Location: 30587 - 31948 (+)
Gene ID: HRGMv2_2495_12_36
Type: CAZyme
Location: 31956 - 34976 (+)
Gene ID: HRGMv2_2495_12_37
Type: pfam
Location: 34973 - 36358 (+)
Gene ID: HRGMv2_2495_12_38
Type: CAZyme
Location: 36379 - 37626 (+)
Gene ID: HRGMv2_2495_12_39
Type: CAZyme
Location: 37630 - 38466 (+)
Gene ID: HRGMv2_2495_12_40
Type: CAZyme
Location: 38463 - 39248 (+)
Gene ID: HRGMv2_2495_12_41
Type: CAZyme
Location: 39250 - 39984 (+)
Gene ID: HRGMv2_2495_12_42
Type: pfam
Location: 39988 - 40341 (+)
Gene ID: HRGMv2_2495_12_43
Type: CAZyme
Location: 40331 - 41308 (+)
Gene ID: HRGMv2_2495_12_44
Type: CAZyme
Location: 41308 - 42270 (+)
Gene ID: HRGMv2_2495_12_45
Type: CAZyme
Location: 42279 - 43241 (+)
Gene ID: HRGMv2_2495_12_46
Type: pfam
Location: 43238 - 44056 (+)
Gene ID: HRGMv2_2495_12_47
Type: TC
Location: 44074 - 45510 (+)
Gene ID: HRGMv2_2495_12_48
Type: pfam
Location: 45689 - 47800 (+)
Gene ID: HRGMv2_2495_12_49
Type: pfam
Location: 47806 - 48228 (+)
Gene ID: HRGMv2_2495_12_50
Type: CAZyme
Location: 48254 - 50326 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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