Cluster: HRGMv2_2495_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_2495
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2495_12 | HRGMv2_2495_12_1 | 71 | 505 | + | 4.A.3.2.4 |
| TC | HRGMv2_2495_12 | HRGMv2_2495_12_2 | 653 | 1555 | + | 4.A.3.2.4 |
| NULL(UNKNOWN) | HRGMv2_2495_12 | HRGMv2_2495_12_3 | 1680 | 1886 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2495_12 | HRGMv2_2495_12_4 | 1883 | 2077 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2495_12 | HRGMv2_2495_12_5 | 2208 | 3644 | + | GH1 |
Gene ID: HRGMv2_2495_12_1
Type: TC
Location: 71 - 505 (+)
Type: TC
Location: 71 - 505 (+)
Gene ID: HRGMv2_2495_12_2
Type: TC
Location: 653 - 1555 (+)
Type: TC
Location: 653 - 1555 (+)
Gene ID: HRGMv2_2495_12_3
Type:
Location: 1680 - 1886 (+)
Type:
Location: 1680 - 1886 (+)
Gene ID: HRGMv2_2495_12_4
Type:
Location: 1883 - 2077 (+)
Type:
Location: 1883 - 2077 (+)
Gene ID: HRGMv2_2495_12_5
Type: CAZyme
Location: 2208 - 3644 (+)
Type: CAZyme
Location: 2208 - 3644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.