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Cluster: HRGMv2_2495_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2495_9 HRGMv2_2495_9_37 40753 42123 + 2.A.26.1.9
pfam HRGMv2_2495_9 HRGMv2_2495_9_38 42402 43412 - Collagen_bind | Cna_B | Big_8
NULL(UNKNOWN) HRGMv2_2495_9 HRGMv2_2495_9_39 43409 43654 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2495_9 HRGMv2_2495_9_40 43681 44574 - CE4
NULL(UNKNOWN) HRGMv2_2495_9 HRGMv2_2495_9_41 44584 44844 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2495_9 HRGMv2_2495_9_42 44847 46067 - GT2
pfam HRGMv2_2495_9 HRGMv2_2495_9_43 46072 47103 - Acyl_transf_3
TC HRGMv2_2495_9 HRGMv2_2495_9_44 47590 50346 - 3.A.3.2.21
Gene ID: HRGMv2_2495_9_37
Type: TC
Location: 40753 - 42123 (+)
Gene ID: HRGMv2_2495_9_38
Type: pfam
Location: 42402 - 43412 (-)
Gene ID: HRGMv2_2495_9_39
Type:
Location: 43409 - 43654 (-)
Gene ID: HRGMv2_2495_9_40
Type: CAZyme
Location: 43681 - 44574 (-)
Gene ID: HRGMv2_2495_9_41
Type:
Location: 44584 - 44844 (-)
Gene ID: HRGMv2_2495_9_42
Type: CAZyme
Location: 44847 - 46067 (-)
Gene ID: HRGMv2_2495_9_43
Type: pfam
Location: 46072 - 47103 (-)
Gene ID: HRGMv2_2495_9_44
Type: TC
Location: 47590 - 50346 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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