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Cluster: HRGMv2_2495_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2495_9 HRGMv2_2495_9_16 14058 15779 - 3.A.1.129.1
TC HRGMv2_2495_9 HRGMv2_2495_9_17 15779 17641 - 3.A.1.129.1
TC HRGMv2_2495_9 HRGMv2_2495_9_18 17948 18943 - 3.D.4.3.2
TC HRGMv2_2495_9 HRGMv2_2495_9_19 18943 20418 - 3.D.4.3.2
TC HRGMv2_2495_9 HRGMv2_2495_9_20 21134 22525 - 2.A.17.1.1
CAZyme HRGMv2_2495_9 HRGMv2_2495_9_21 22853 24655 - GH13_39
CAZyme HRGMv2_2495_9 HRGMv2_2495_9_22 24745 27147 - GT35
CAZyme HRGMv2_2495_9 HRGMv2_2495_9_23 27236 28672 - GT5
pfam HRGMv2_2495_9 HRGMv2_2495_9_24 28764 29903 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2495_9 HRGMv2_2495_9_25 29893 31035 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme HRGMv2_2495_9 HRGMv2_2495_9_26 31136 33139 - GH77
Gene ID: HRGMv2_2495_9_16
Type: TC
Location: 14058 - 15779 (-)
Gene ID: HRGMv2_2495_9_17
Type: TC
Location: 15779 - 17641 (-)
Gene ID: HRGMv2_2495_9_18
Type: TC
Location: 17948 - 18943 (-)
Gene ID: HRGMv2_2495_9_19
Type: TC
Location: 18943 - 20418 (-)
Gene ID: HRGMv2_2495_9_20
Type: TC
Location: 21134 - 22525 (-)
Gene ID: HRGMv2_2495_9_21
Type: CAZyme
Location: 22853 - 24655 (-)
Gene ID: HRGMv2_2495_9_22
Type: CAZyme
Location: 24745 - 27147 (-)
Gene ID: HRGMv2_2495_9_23
Type: CAZyme
Location: 27236 - 28672 (-)
Gene ID: HRGMv2_2495_9_24
Type: pfam
Location: 28764 - 29903 (-)
Gene ID: HRGMv2_2495_9_25
Type: pfam
Location: 29893 - 31035 (-)
Gene ID: HRGMv2_2495_9_26
Type: CAZyme
Location: 31136 - 33139 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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