Cluster: HRGMv2_2495_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2495
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2495_6 | HRGMv2_2495_6_50 | 47086 | 48522 | - | GH1 |
| TC | HRGMv2_2495_6 | HRGMv2_2495_6_51 | 48604 | 49941 | - | 4.A.3.2.2 |
| TF | HRGMv2_2495_6 | HRGMv2_2495_6_52 | 50233 | 50961 | - | HTH_6 |
| TC | HRGMv2_2495_6 | HRGMv2_2495_6_53 | 51055 | 51405 | - | 4.A.3.2.4 |
| TC | HRGMv2_2495_6 | HRGMv2_2495_6_54 | 51490 | 51816 | - | 4.A.3.2.4 |
Gene ID: HRGMv2_2495_6_50
Type: CAZyme
Location: 47086 - 48522 (-)
Type: CAZyme
Location: 47086 - 48522 (-)
Gene ID: HRGMv2_2495_6_51
Type: TC
Location: 48604 - 49941 (-)
Type: TC
Location: 48604 - 49941 (-)
Gene ID: HRGMv2_2495_6_52
Type: TF
Location: 50233 - 50961 (-)
Type: TF
Location: 50233 - 50961 (-)
Gene ID: HRGMv2_2495_6_53
Type: TC
Location: 51055 - 51405 (-)
Type: TC
Location: 51055 - 51405 (-)
Gene ID: HRGMv2_2495_6_54
Type: TC
Location: 51490 - 51816 (-)
Type: TC
Location: 51490 - 51816 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.