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Cluster: HRGMv2_2493_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2493_9 HRGMv2_2493_9_2 1677 3140 + 2.A.2.3.2
CAZyme HRGMv2_2493_9 HRGMv2_2493_9_3 3179 5218 + GH120
pfam HRGMv2_2493_9 HRGMv2_2493_9_4 6371 6934 + AhpC-TSA | Redoxin | 1-cysPrx_C
STP HRGMv2_2493_9 HRGMv2_2493_9_5 6953 8611 + Pyr_redox_2
CAZyme HRGMv2_2493_9 HRGMv2_2493_9_6 8889 11096 + GH3
TF HRGMv2_2493_9 HRGMv2_2493_9_7 11754 12836 + GntR
pfam HRGMv2_2493_9 HRGMv2_2493_9_8 13269 14630 + PGI
TC HRGMv2_2493_9 HRGMv2_2493_9_9 14741 15439 + 1.A.8.2.5
pfam HRGMv2_2493_9 HRGMv2_2493_9_10 15757 16122 + DUF1304
peptidase HRGMv2_2493_9 HRGMv2_2493_9_11 16257 16985 - M10.UPW
TC HRGMv2_2493_9 HRGMv2_2493_9_12 17135 17989 - 8.A.5.1.6
TC HRGMv2_2493_9 HRGMv2_2493_9_13 18309 18863 + 3.A.1.26.9
Gene ID: HRGMv2_2493_9_2
Type: TC
Location: 1677 - 3140 (+)
Gene ID: HRGMv2_2493_9_3
Type: CAZyme
Location: 3179 - 5218 (+)
Gene ID: HRGMv2_2493_9_4
Type: pfam
Location: 6371 - 6934 (+)
Gene ID: HRGMv2_2493_9_5
Type: STP
Location: 6953 - 8611 (+)
Gene ID: HRGMv2_2493_9_6
Type: CAZyme
Location: 8889 - 11096 (+)
Gene ID: HRGMv2_2493_9_7
Type: TF
Location: 11754 - 12836 (+)
Gene ID: HRGMv2_2493_9_8
Type: pfam
Location: 13269 - 14630 (+)
Gene ID: HRGMv2_2493_9_9
Type: TC
Location: 14741 - 15439 (+)
Gene ID: HRGMv2_2493_9_10
Type: pfam
Location: 15757 - 16122 (+)
Gene ID: HRGMv2_2493_9_11
Type: peptidase
Location: 16257 - 16985 (-)
Gene ID: HRGMv2_2493_9_12
Type: TC
Location: 17135 - 17989 (-)
Gene ID: HRGMv2_2493_9_13
Type: TC
Location: 18309 - 18863 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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