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Cluster: HRGMv2_2493_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2493_6 HRGMv2_2493_6_45 47578 48996 - 2.A.47.3.1
pfam HRGMv2_2493_6 HRGMv2_2493_6_46 49037 49957 - Ldh_1_N | Ldh_1_C
TC HRGMv2_2493_6 HRGMv2_2493_6_47 50153 51541 - 3.D.10.1.4
pfam HRGMv2_2493_6 HRGMv2_2493_6_48 51558 52955 - Lyase_1 | FumaraseC_C
TC HRGMv2_2493_6 HRGMv2_2493_6_49 53293 53883 - 3.D.1.8.1
TC HRGMv2_2493_6 HRGMv2_2493_6_50 54000 55934 - 4.A.1.2.12
pfam HRGMv2_2493_6 HRGMv2_2493_6_51 56158 57198 - ADH_N
pfam HRGMv2_2493_6 HRGMv2_2493_6_52 57286 57732 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_2493_6 HRGMv2_2493_6_53 57834 59297 + GH32
Gene ID: HRGMv2_2493_6_45
Type: TC
Location: 47578 - 48996 (-)
Gene ID: HRGMv2_2493_6_46
Type: pfam
Location: 49037 - 49957 (-)
Gene ID: HRGMv2_2493_6_47
Type: TC
Location: 50153 - 51541 (-)
Gene ID: HRGMv2_2493_6_48
Type: pfam
Location: 51558 - 52955 (-)
Gene ID: HRGMv2_2493_6_49
Type: TC
Location: 53293 - 53883 (-)
Gene ID: HRGMv2_2493_6_50
Type: TC
Location: 54000 - 55934 (-)
Gene ID: HRGMv2_2493_6_51
Type: pfam
Location: 56158 - 57198 (-)
Gene ID: HRGMv2_2493_6_52
Type: pfam
Location: 57286 - 57732 (+)
Gene ID: HRGMv2_2493_6_53
Type: CAZyme
Location: 57834 - 59297 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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