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Cluster: HRGMv2_2493_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2493_2 HRGMv2_2493_2_50 56041 58014 + CBM48 | GH13_9
pfam HRGMv2_2493_2 HRGMv2_2493_2_51 58050 59195 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2493_2 HRGMv2_2493_2_52 59185 60345 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2493_2 HRGMv2_2493_2_53 60348 61775 + GT5
CAZyme HRGMv2_2493_2 HRGMv2_2493_2_54 61811 64210 + GT35
CAZyme HRGMv2_2493_2 HRGMv2_2493_2_55 64223 66058 + GH13_39
TC HRGMv2_2493_2 HRGMv2_2493_2_56 66616 67467 + 3.A.1.24.3
Gene ID: HRGMv2_2493_2_50
Type: CAZyme
Location: 56041 - 58014 (+)
Gene ID: HRGMv2_2493_2_51
Type: pfam
Location: 58050 - 59195 (+)
Gene ID: HRGMv2_2493_2_52
Type: pfam
Location: 59185 - 60345 (+)
Gene ID: HRGMv2_2493_2_53
Type: CAZyme
Location: 60348 - 61775 (+)
Gene ID: HRGMv2_2493_2_54
Type: CAZyme
Location: 61811 - 64210 (+)
Gene ID: HRGMv2_2493_2_55
Type: CAZyme
Location: 64223 - 66058 (+)
Gene ID: HRGMv2_2493_2_56
Type: TC
Location: 66616 - 67467 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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