Cluster: HRGMv2_2493_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2493
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2493_46 | HRGMv2_2493_46_3 | 1802 | 2824 | - | GT4 |
| CAZyme | HRGMv2_2493_46 | HRGMv2_2493_46_4 | 2827 | 4035 | - | GT4 |
| TC | HRGMv2_2493_46 | HRGMv2_2493_46_5 | 4197 | 5930 | - | 8.A.7.1.1 |
| TC | HRGMv2_2493_46 | HRGMv2_2493_46_6 | 5932 | 6198 | - | 8.A.8.1.1 |
| NULL(UNKNOWN) | HRGMv2_2493_46 | HRGMv2_2493_46_7 | 6329 | 6517 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2493_46 | HRGMv2_2493_46_8 | 6801 | 9059 | + | 3.A.9.1.2 |
Gene ID: HRGMv2_2493_46_3
Type: CAZyme
Location: 1802 - 2824 (-)
Type: CAZyme
Location: 1802 - 2824 (-)
Gene ID: HRGMv2_2493_46_4
Type: CAZyme
Location: 2827 - 4035 (-)
Type: CAZyme
Location: 2827 - 4035 (-)
Gene ID: HRGMv2_2493_46_5
Type: TC
Location: 4197 - 5930 (-)
Type: TC
Location: 4197 - 5930 (-)
Gene ID: HRGMv2_2493_46_6
Type: TC
Location: 5932 - 6198 (-)
Type: TC
Location: 5932 - 6198 (-)
Gene ID: HRGMv2_2493_46_7
Type:
Location: 6329 - 6517 (-)
Type:
Location: 6329 - 6517 (-)
Gene ID: HRGMv2_2493_46_8
Type: TC
Location: 6801 - 9059 (+)
Type: TC
Location: 6801 - 9059 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus sp012843675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.