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Cluster: HRGMv2_2493_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2493_26 HRGMv2_2493_26_1 1 3276 - GH25
STP HRGMv2_2493_26 HRGMv2_2493_26_2 3357 6089 - Peptidase_M23
NULL(UNKNOWN) HRGMv2_2493_26 HRGMv2_2493_26_3 6325 7173 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2493_26 HRGMv2_2493_26_4 7446 8867 - 2.A.66.2.16
STP HRGMv2_2493_26 HRGMv2_2493_26_5 8871 9992 - Pyr_redox
CAZyme HRGMv2_2493_26 HRGMv2_2493_26_6 10105 10875 - GT111
CAZyme HRGMv2_2493_26 HRGMv2_2493_26_7 10890 11813 - GT2
CAZyme HRGMv2_2493_26 HRGMv2_2493_26_8 11822 12817 - GT2
Gene ID: HRGMv2_2493_26_1
Type: CAZyme
Location: 1 - 3276 (-)
Gene ID: HRGMv2_2493_26_2
Type: STP
Location: 3357 - 6089 (-)
Gene ID: HRGMv2_2493_26_3
Type:
Location: 6325 - 7173 (-)
Gene ID: HRGMv2_2493_26_4
Type: TC
Location: 7446 - 8867 (-)
Gene ID: HRGMv2_2493_26_5
Type: STP
Location: 8871 - 9992 (-)
Gene ID: HRGMv2_2493_26_6
Type: CAZyme
Location: 10105 - 10875 (-)
Gene ID: HRGMv2_2493_26_7
Type: CAZyme
Location: 10890 - 11813 (-)
Gene ID: HRGMv2_2493_26_8
Type: CAZyme
Location: 11822 - 12817 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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