dbCAN Logo

Cluster: HRGMv2_2493_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2493_19 HRGMv2_2493_19_1 23 529 - GT2
TC HRGMv2_2493_19 HRGMv2_2493_19_2 529 1188 - 9.B.18.1.3
NULL(UNKNOWN) HRGMv2_2493_19 HRGMv2_2493_19_3 1470 1991 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2493_19 HRGMv2_2493_19_4 1994 2350 + DDE_Tnp_1 | DDE_Tnp_1_3
CAZyme HRGMv2_2493_19 HRGMv2_2493_19_5 2347 2853 - GT2
TC HRGMv2_2493_19 HRGMv2_2493_19_6 2853 3524 - 9.B.18.1.3
pfam HRGMv2_2493_19 HRGMv2_2493_19_7 3508 4470 - adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
pfam HRGMv2_2493_19 HRGMv2_2493_19_8 4545 5315 - CpsB_CapC
TC HRGMv2_2493_19 HRGMv2_2493_19_9 5346 6110 - 8.A.3.3.1
TC HRGMv2_2493_19 HRGMv2_2493_19_10 6123 6980 - 8.A.3.2.4
Gene ID: HRGMv2_2493_19_1
Type: CAZyme
Location: 23 - 529 (-)
Gene ID: HRGMv2_2493_19_2
Type: TC
Location: 529 - 1188 (-)
Gene ID: HRGMv2_2493_19_3
Type:
Location: 1470 - 1991 (+)
Gene ID: HRGMv2_2493_19_4
Type: pfam
Location: 1994 - 2350 (+)
Gene ID: HRGMv2_2493_19_5
Type: CAZyme
Location: 2347 - 2853 (-)
Gene ID: HRGMv2_2493_19_6
Type: TC
Location: 2853 - 3524 (-)
Gene ID: HRGMv2_2493_19_7
Type: pfam
Location: 3508 - 4470 (-)
Gene ID: HRGMv2_2493_19_8
Type: pfam
Location: 4545 - 5315 (-)
Gene ID: HRGMv2_2493_19_9
Type: TC
Location: 5346 - 6110 (-)
Gene ID: HRGMv2_2493_19_10
Type: TC
Location: 6123 - 6980 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List