dbCAN Logo

Cluster: HRGMv2_2493_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2493_10 HRGMv2_2493_10_12 11371 12729 + 2.A.1.7.5
TC HRGMv2_2493_10 HRGMv2_2493_10_13 12827 14056 - 1.A.11.1.4
TC HRGMv2_2493_10 HRGMv2_2493_10_14 14324 15658 + 2.A.66.1.13
TC HRGMv2_2493_10 HRGMv2_2493_10_15 15751 16620 + 8.A.5.1.4
TC HRGMv2_2493_10 HRGMv2_2493_10_16 16679 17443 - 3.A.1.34.1
TC HRGMv2_2493_10 HRGMv2_2493_10_17 17436 18335 - 3.A.1.34.1
TC HRGMv2_2493_10 HRGMv2_2493_10_18 18332 19324 - 3.A.1.34.1
STP HRGMv2_2493_10 HRGMv2_2493_10_19 19683 20912 + Aminotran_1_2
pfam HRGMv2_2493_10 HRGMv2_2493_10_20 20893 21324 + NifU_N
CAZyme HRGMv2_2493_10 HRGMv2_2493_10_21 21422 22507 - CBM50
pfam HRGMv2_2493_10 HRGMv2_2493_10_22 22701 23210 - Flavodoxin_2 | FMN_red
TC HRGMv2_2493_10 HRGMv2_2493_10_23 23378 24922 + 3.A.1.120.4
Gene ID: HRGMv2_2493_10_12
Type: TC
Location: 11371 - 12729 (+)
Gene ID: HRGMv2_2493_10_13
Type: TC
Location: 12827 - 14056 (-)
Gene ID: HRGMv2_2493_10_14
Type: TC
Location: 14324 - 15658 (+)
Gene ID: HRGMv2_2493_10_15
Type: TC
Location: 15751 - 16620 (+)
Gene ID: HRGMv2_2493_10_16
Type: TC
Location: 16679 - 17443 (-)
Gene ID: HRGMv2_2493_10_17
Type: TC
Location: 17436 - 18335 (-)
Gene ID: HRGMv2_2493_10_18
Type: TC
Location: 18332 - 19324 (-)
Gene ID: HRGMv2_2493_10_19
Type: STP
Location: 19683 - 20912 (+)
Gene ID: HRGMv2_2493_10_20
Type: pfam
Location: 20893 - 21324 (+)
Gene ID: HRGMv2_2493_10_21
Type: CAZyme
Location: 21422 - 22507 (-)
Gene ID: HRGMv2_2493_10_22
Type: pfam
Location: 22701 - 23210 (-)
Gene ID: HRGMv2_2493_10_23
Type: TC
Location: 23378 - 24922 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List